name: /home/hossiny/marina_turbo/conda/envs/single_cell
channels:
  - conda-forge
  - bioconda
  - defaults
  - r
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - bzip2=1.0.8=h4bc722e_7
  - ca-certificates=2024.12.14=hbcca054_0
  - ld_impl_linux-64=2.43=h712a8e2_2
  - libexpat=2.6.4=h5888daf_0
  - libffi=3.4.2=h7f98852_5
  - libgcc=14.2.0=h77fa898_1
  - libgcc-ng=14.2.0=h69a702a_1
  - libgomp=14.2.0=h77fa898_1
  - liblzma=5.6.3=hb9d3cd8_1
  - libnsl=2.0.1=hd590300_0
  - libsqlite=3.47.2=hee588c1_0
  - libuuid=2.38.1=h0b41bf4_0
  - libxcrypt=4.4.36=hd590300_1
  - libzlib=1.3.1=hb9d3cd8_2
  - ncurses=6.5=h2d0b736_2
  - openssl=3.4.0=h7b32b05_1
  - pip=24.3.1=pyh8b19718_2
  - python=3.12.8=h9e4cc4f_1_cpython
  - readline=8.2=h8228510_1
  - setuptools=75.8.0=pyhff2d567_0
  - tk=8.6.13=noxft_h4845f30_101
  - wheel=0.45.1=pyhd8ed1ab_1
  - pip:
      - absl-py==2.1.0
      - aiobotocore==2.5.4
      - aiohappyeyeballs==2.6.1
      - aiohttp==3.12.15
      - aioitertools==0.12.0
      - aiosignal==1.4.0
      - anndata==0.11.3
      - annotated-types==0.7.0
      - anyio==4.9.0
      - argon2-cffi==23.1.0
      - argon2-cffi-bindings==21.2.0
      - array-api-compat==1.10.0
      - arrow==1.3.0
      - asciitree==0.3.3
      - asgiref==3.9.1
      - asttokens==3.0.0
      - async-lru==2.0.5
      - attrs==24.3.0
      - babel==2.17.0
      - beautifulsoup4==4.13.4
      - bleach==6.2.0
      - boto3==1.28.17
      - botocore==1.31.17
      - certifi==2024.12.14
      - cffi==1.17.1
      - charset-normalizer==3.4.1
      - chex==0.1.88
      - click==8.1.8
      - cloudpickle==3.1.1
      - colorcet==3.1.0
      - comm==0.2.2
      - contourpy==1.3.1
      - cycler==0.12.1
      - dask==2025.1.0
      - dask-image==2024.5.3
      - datashader==0.16.3
      - debugpy==1.8.12
      - decorator==5.1.1
      - defusedxml==0.7.1
      - deprecated==1.2.18
      - deprecation==2.1.0
      - distributed==2025.1.0
      - dj-database-url==2.3.0
      - django==5.1.11
      - docrep==0.3.2
      - etils==1.11.0
      - executing==2.1.0
      - fasteners==0.19
      - fastjsonschema==2.21.1
      - filelock==3.16.1
      - flax==0.10.2
      - fonttools==4.55.3
      - fqdn==1.5.1
      - frozenlist==1.5.0
      - fsspec==2025.3.2
      - geopandas==1.0.1
      - gotrue==2.12.0
      - grpcio==1.69.0
      - h11==0.14.0
      - h2==4.2.0
      - h5py==3.12.1
      - hpack==4.1.0
      - httpcore==1.0.8
      - httpx==0.28.1
      - humanize==4.11.0
      - hyperframe==6.1.0
      - idna==3.10
      - igraph==0.11.8
      - imageio==2.36.1
      - importlib-resources==6.5.2
      - inflect==7.5.0
      - iniconfig==2.1.0
      - ipykernel==6.29.5
      - ipython==8.31.0
      - ipywidgets==8.1.6
      - isoduration==20.11.0
      - jax==0.4.38
      - jaxlib==0.4.38
      - jedi==0.19.2
      - jinja2==3.1.5
      - jmespath==1.0.1
      - joblib==1.4.2
      - json5==0.12.0
      - jsonpointer==3.0.0
      - jsonschema==4.23.0
      - jsonschema-specifications==2024.10.1
      - jupyter==1.1.1
      - jupyter-client==8.6.3
      - jupyter-console==6.6.3
      - jupyter-core==5.7.2
      - jupyter-events==0.12.0
      - jupyter-lsp==2.2.5
      - jupyter-server==2.15.0
      - jupyter-server-terminals==0.5.3
      - jupyterlab==4.4.0
      - jupyterlab-pygments==0.3.0
      - jupyterlab-server==2.27.3
      - jupyterlab-widgets==3.0.14
      - kiwisolver==1.4.8
      - lamin-cli==1.6.1
      - lamin-utils==0.15.0
      - lamindb==1.10.0
      - lamindb-setup==1.9.0
      - lazy-loader==0.4
      - legacy-api-wrap==1.4.1
      - leidenalg==0.10.2
      - lightning==2.5.0.post0
      - lightning-utilities==0.11.9
      - llvmlite==0.43.0
      - locket==1.0.0
      - markdown==3.7
      - markdown-it-py==3.0.0
      - markupsafe==3.0.2
      - matplotlib==3.10.0
      - matplotlib-inline==0.1.7
      - matplotlib-scalebar==0.9.0
      - mdurl==0.1.2
      - mistune==3.1.3
      - ml-collections==1.0.0
      - ml-dtypes==0.5.1
      - more-itertools==10.6.0
      - mpmath==1.3.0
      - msgpack==1.1.0
      - mudata==0.3.1
      - multidict==6.1.0
      - multipledispatch==1.0.0
      - multiscale-spatial-image==1.0.1
      - mypy-extensions==1.1.0
      - natsort==8.4.0
      - nbclient==0.10.2
      - nbconvert==7.16.6
      - nbformat==5.10.4
      - nest-asyncio==1.6.0
      - networkx==3.4.2
      - notebook==7.4.0
      - notebook-shim==0.2.4
      - numba==0.60.0
      - numcodecs==0.15.0
      - numpy==2.0.2
      - numpyro==0.16.1
      - nvidia-cublas-cu12==12.4.5.8
      - nvidia-cuda-cupti-cu12==12.4.127
      - nvidia-cuda-nvrtc-cu12==12.4.127
      - nvidia-cuda-runtime-cu12==12.4.127
      - nvidia-cudnn-cu12==9.1.0.70
      - nvidia-cufft-cu12==11.2.1.3
      - nvidia-curand-cu12==10.3.5.147
      - nvidia-cusolver-cu12==11.6.1.9
      - nvidia-cusparse-cu12==12.3.1.170
      - nvidia-nccl-cu12==2.21.5
      - nvidia-nvjitlink-cu12==12.4.127
      - nvidia-nvtx-cu12==12.4.127
      - ome-zarr==0.10.3
      - omnipath==1.0.8
      - opt-einsum==3.4.0
      - optax==0.2.4
      - orbax-checkpoint==0.11.0
      - overrides==7.7.0
      - packaging==24.2
      - pandas==2.2.3
      - pandera==0.25.0
      - pandocfilters==1.5.1
      - param==2.2.0
      - parso==0.8.4
      - partd==1.4.2
      - patsy==1.0.1
      - pexpect==4.9.0
      - pillow==11.1.0
      - pims==0.7
      - platformdirs==4.3.6
      - pluggy==1.6.0
      - pooch==1.8.2
      - postgrest==1.0.2
      - prometheus-client==0.21.1
      - prompt-toolkit==3.0.48
      - propcache==0.2.1
      - protobuf==5.29.3
      - psutil==6.1.1
      - psycopg2-binary==2.9.10
      - ptyprocess==0.7.0
      - pure-eval==0.2.3
      - pyarrow==19.0.0
      - pyarrow-hotfix==0.7
      - pycparser==2.22
      - pyct==0.5.0
      - pydantic==2.11.7
      - pydantic-core==2.33.2
      - pydantic-settings==2.10.1
      - pygments==2.19.1
      - pyjwt==2.10.1
      - pynndescent==0.5.13
      - pyogrio==0.10.0
      - pyparsing==3.2.1
      - pyproj==3.7.0
      - pyro-api==0.1.2
      - pyro-ppl==1.9.1
      - pytest==8.4.1
      - pytest-mock==3.14.1
      - python-dateutil==2.9.0.post0
      - python-dotenv==1.1.1
      - python-graphviz==0.21
      - python-json-logger==3.3.0
      - pytorch-lightning==2.5.0.post0
      - pytz==2024.2
      - pyyaml==6.0.2
      - pyzmq==26.2.0
      - realtime==2.4.3
      - referencing==0.36.2
      - requests==2.32.3
      - rfc3339-validator==0.1.4
      - rfc3986-validator==0.1.1
      - rich==13.9.4
      - rich-click==1.8.9
      - rpds-py==0.24.0
      - s3fs==2025.3.2
      - s3transfer==0.6.2
      - scanpy==1.10.4
      - scikit-image==0.25.0
      - scikit-learn==1.6.1
      - scipy==1.14.1
      - scvi-tools==1.3.3
      - seaborn==0.13.2
      - send2trash==1.8.3
      - session-info==1.0.0
      - shapely==2.0.6
      - simplejson==3.19.3
      - six==1.17.0
      - slicerator==1.1.0
      - sniffio==1.3.1
      - somacore==1.0.28
      - sortedcontainers==2.4.0
      - soupsieve==2.6
      - sparse==0.15.5
      - spatial-image==1.1.0
      - spatialdata==0.2.5.post0
      - sqlparse==0.5.3
      - squidpy==1.6.2
      - stack-data==0.6.3
      - statsmodels==0.14.4
      - stdlib-list==0.11.0
      - storage3==0.11.3
      - strenum==0.4.15
      - supabase==2.15.0
      - supafunc==0.9.4
      - sympy==1.13.1
      - tblib==3.0.0
      - tensorboard==2.18.0
      - tensorboard-data-server==0.7.2
      - tensorstore==0.1.71
      - terminado==0.18.1
      - texttable==1.7.0
      - threadpoolctl==3.5.0
      - tifffile==2025.1.10
      - tiledbsoma==1.17.1
      - tinycss2==1.4.0
      - toolz==1.0.0
      - torch==2.5.1
      - torchmetrics==1.6.1
      - tornado==6.4.2
      - tqdm==4.67.1
      - traitlets==5.14.3
      - triton==3.1.0
      - typeguard==4.4.1
      - types-python-dateutil==2.9.0.20241206
      - typing-extensions==4.14.1
      - typing-inspect==0.9.0
      - typing-inspection==0.4.1
      - tzdata==2024.2
      - umap-learn==0.5.7
      - universal-pathlib==0.2.6
      - uri-template==1.3.0
      - urllib3==1.26.20
      - validators==0.34.0
      - wcwidth==0.2.13
      - webcolors==24.11.1
      - webencodings==0.5.1
      - websocket-client==1.8.0
      - websockets==14.2
      - werkzeug==3.1.3
      - widgetsnbextension==4.0.14
      - wrapt==1.17.2
      - xarray==2024.7.0
      - xarray-dataclasses==1.9.1
      - xarray-datatree==0.0.15
      - xarray-schema==0.0.3
      - xarray-spatial==0.4.0
      - yarl==1.18.3
      - zarr==2.18.4
      - zict==3.0.0
      - zipp==3.21.0
prefix: /home/hossiny/marina_turbo/conda/envs/single_cell