name: cellbender
channels:
  - conda-forge
  - bioconda
  - defaults
  - r
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - ca-certificates=2024.8.30=hbcca054_0
  - ld_impl_linux-64=2.43=h712a8e2_2
  - libffi=3.4.2=h7f98852_5
  - libgcc=14.2.0=h77fa898_1
  - libgcc-ng=14.2.0=h69a702a_1
  - libgomp=14.2.0=h77fa898_1
  - liblzma=5.6.3=hb9d3cd8_1
  - liblzma-devel=5.6.3=hb9d3cd8_1
  - libnsl=2.0.1=hd590300_0
  - libsqlite=3.47.2=hee588c1_0
  - libstdcxx=14.2.0=hc0a3c3a_1
  - libstdcxx-ng=14.2.0=h4852527_1
  - libzlib=1.3.1=hb9d3cd8_2
  - ncurses=6.5=he02047a_1
  - openssl=3.4.0=hb9d3cd8_0
  - pip=22.1.2=pyhd8ed1ab_0
  - python=3.7.12=hf930737_100_cpython
  - readline=8.2=h8228510_1
  - setuptools=65.6.3=pyhd8ed1ab_0
  - sqlite=3.47.2=h9eae976_0
  - tk=8.6.13=noxft_h4845f30_101
  - wheel=0.34.2=py37_0
  - xz=5.6.3=hbcc6ac9_1
  - xz-gpl-tools=5.6.3=hbcc6ac9_1
  - xz-tools=5.6.3=hb9d3cd8_1
  - pip:
      - aiofiles==22.1.0
      - aiosqlite==0.19.0
      - anndata==0.8.0
      - anyio==3.7.1
      - argon2-cffi==23.1.0
      - argon2-cffi-bindings==21.2.0
      - arrow==1.2.3
      - attrs==24.2.0
      - babel==2.14.0
      - backcall==0.2.0
      - beautifulsoup4==4.12.3
      - bleach==6.0.0
      - cached-property==1.5.2
      - cellbender==0.3.0
      - certifi==2024.8.30
      - cffi==1.15.1
      - charset-normalizer==3.4.0
      - click==8.1.7
      - comm==0.1.4
      - cycler==0.11.0
      - debugpy==1.7.0
      - decorator==5.1.1
      - defusedxml==0.7.1
      - entrypoints==0.4
      - exceptiongroup==1.2.2
      - fastjsonschema==2.21.1
      - fonttools==4.38.0
      - fqdn==1.5.1
      - h5py==3.8.0
      - idna==3.10
      - importlib-metadata==6.7.0
      - importlib-resources==5.12.0
      - ipykernel==6.16.2
      - ipython==7.34.0
      - ipython-genutils==0.2.0
      - ipywidgets==8.1.5
      - isoduration==20.11.0
      - jedi==0.19.2
      - jinja2==3.1.4
      - json5==0.9.16
      - jsonpointer==3.0.0
      - jsonschema==4.17.3
      - jupyter==1.1.1
      - jupyter-client==7.4.9
      - jupyter-console==6.6.3
      - jupyter-contrib-core==0.4.2
      - jupyter-contrib-nbextensions==0.7.0
      - jupyter-core==4.12.0
      - jupyter-events==0.6.3
      - jupyter-highlight-selected-word==0.2.0
      - jupyter-nbextensions-configurator==0.6.4
      - jupyter-server==1.24.0
      - jupyter-server-fileid==0.9.3
      - jupyter-server-ydoc==0.8.0
      - jupyter-ydoc==0.2.5
      - jupyterlab==3.6.8
      - jupyterlab-pygments==0.2.2
      - jupyterlab-server==2.24.0
      - jupyterlab-widgets==3.0.13
      - kiwisolver==1.4.5
      - llvmlite==0.39.1
      - loompy==3.0.7
      - lxml==5.3.0
      - markupsafe==2.1.5
      - matplotlib==3.5.3
      - matplotlib-inline==0.1.6
      - mistune==0.8.4
      - natsort==8.4.0
      - nbclassic==1.1.0
      - nbclient==0.7.4
      - nbconvert==6.5.4
      - nbformat==5.8.0
      - nest-asyncio==1.6.0
      - notebook==6.5.7
      - notebook-shim==0.2.4
      - numba==0.56.4
      - numexpr==2.8.6
      - numpy==1.21.6
      - numpy-groupies==0.9.22
      - nvidia-cublas-cu11==11.10.3.66
      - nvidia-cuda-nvrtc-cu11==11.7.99
      - nvidia-cuda-runtime-cu11==11.7.99
      - nvidia-cudnn-cu11==8.5.0.96
      - opt-einsum==3.3.0
      - packaging==24.0
      - pandas==1.3.5
      - pandocfilters==1.5.1
      - parso==0.8.4
      - pexpect==4.9.0
      - pickleshare==0.7.5
      - pillow==9.5.0
      - pkgutil-resolve-name==1.3.10
      - prometheus-client==0.17.1
      - prompt-toolkit==3.0.48
      - psutil==6.1.0
      - ptyprocess==0.7.0
      - pycparser==2.21
      - pygments==2.17.2
      - pyparsing==3.1.4
      - pyro-api==0.1.2
      - pyro-ppl==1.8.6
      - pyrsistent==0.19.3
      - python-dateutil==2.9.0.post0
      - python-json-logger==2.0.7
      - pytz==2024.2
      - pyyaml==6.0.1
      - pyzmq==26.2.0
      - requests==2.31.0
      - rfc3339-validator==0.1.4
      - rfc3986-validator==0.1.1
      - scipy==1.7.3
      - send2trash==1.8.3
      - six==1.17.0
      - sniffio==1.3.1
      - soupsieve==2.4.1
      - tables==3.7.0
      - terminado==0.17.1
      - tinycss2==1.2.1
      - tomli==2.0.1
      - torch==1.13.1
      - tornado==6.2
      - tqdm==4.67.1
      - traitlets==5.9.0
      - typing-extensions==4.7.1
      - uri-template==1.3.0
      - urllib3==2.0.7
      - wcwidth==0.2.13
      - webcolors==1.13
      - webencodings==0.5.1
      - websocket-client==1.6.1
      - widgetsnbextension==4.0.13
      - y-py==0.6.2
      - ypy-websocket==0.8.4
      - zipp==3.15.0
prefix: cellbender